Tutorials: Difference between revisions
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Available systems are: <code>hBN.tar.gz</code>, <code>hBN-2D.tar.gz</code>. | Available systems are: <code>hBN.tar.gz</code>, <code>hBN-2D.tar.gz</code>. | ||
* CECAM students: download and extract ''hBN'' and ''hBN-2D'', and find your allocated username ''tutoXY'' and node ''node0RS'' from [[CECAM-accounts-2017|this table]]. | * CECAM students: download and extract ''hBN'' and ''hBN-2D''. If using the CECAM iMac, your username is indicated (''tutoXY''). | ||
If connecting from your notebook, a username will be given to you, and log into the CECAM computers via: | |||
$ ssh -X tutoXY@cecampc4.epfl.ch ''(if connecting from your notebook)'' | |||
<!--, and find your allocated username ''tutoXY'' and node ''node0RS'' from [[CECAM-accounts-2017|this table]]. --> | |||
Then connect to the linux cluster, and set up the tutorial as follows: | |||
$ ssh -X node0RS | $ ssh -X node0RS | ||
$ pwd | |||
/nfs_home/tutoXY | |||
$ which pw.x yambo | $ which pw.x yambo | ||
/nfs_home/tutoadmin/bin/pw.x | /nfs_home/tutoadmin/bin/pw.x | ||
/nfs_home/tutoadmin/bin/yambo | /nfs_home/tutoadmin/bin/yambo | ||
$ cd /home/scratch/ ''(NB: do '''not''' run on the /nfs_home partition)'' | $ cd /home/scratch/ ''(NB: do '''not''' run on the /nfs_home partition!)'' | ||
$ mkdir yambo_YOUR_NAME ''(there are more participants than accounts!)'' | $ mkdir yambo_YOUR_NAME ''(there are more participants than accounts!)'' | ||
$ cd yambo_YOUR_NAME | $ cd yambo_YOUR_NAME |
Revision as of 11:56, 6 April 2017
Tutorial files
To follow the tutorials, you must first download or copy data files for each system. Files are distributed as gzipped tarballs. Always extract the tarballs in the same place.
Available systems are: hBN.tar.gz
, hBN-2D.tar.gz
.
- CECAM students: download and extract hBN and hBN-2D. If using the CECAM iMac, your username is indicated (tutoXY).
If connecting from your notebook, a username will be given to you, and log into the CECAM computers via:
$ ssh -X tutoXY@cecampc4.epfl.ch (if connecting from your notebook)
Then connect to the linux cluster, and set up the tutorial as follows:
$ ssh -X node0RS $ pwd /nfs_home/tutoXY $ which pw.x yambo /nfs_home/tutoadmin/bin/pw.x /nfs_home/tutoadmin/bin/yambo $ cd /home/scratch/ (NB: do not run on the /nfs_home partition!) $ mkdir yambo_YOUR_NAME (there are more participants than accounts!) $ cd yambo_YOUR_NAME $ cp /nfs_home/tutoadmin/yambo-2017/tutorials/hBN.tar.gz . $ tar -zxvf hBN.tar.gz $ ls YAMBO_TUTORIALS
- Download: from [this link]
Full tutorials
If you are starting out with Yambo, or even an experienced user, we recommend that you complete the following tutorials before trying to use Yambo for your system. Each tutorial is fairly standalone, although some require that you have completed previous ones.
Introduction
Quasiparticles in the GW approximation
Using Yambo in Parallel
Excitons and the Bethe-Salpeter Equation
- Calculating optical spectra including excitonic effects: a step-by-step guide
- Obtaining a converged optical spectrum
- Many-body effects in low-dimensional systems: numerical issues and remedies
- Analysis of excitonic spectra in a 2D material
- Two particle excitations (try to bypass this page) : Learn how to set up and run calculations to obtain and analyze an optical absorption spectrum of bulk and low dimension materials by using the Bethe-Salpeter equation
Yambo-python driver
Modules
An alternative way to learn Yambo is through a more detailed look at our documentation modules. These provide a focus on the input parameters, run time behaviour, and underlying physics behind each yambo task or runlevel. Although they can be followed separately, they are better followed as part of the more structured tutorials given above. The modules are grouped as follows:
- Generating the Yambo databases
- How to use Yambo
- Tricks for low dimensional systems
- Linear response and screening
- Quasiparticle properties
- Two-particle excitations
Other stuff and old stuff
- Parallelization
- Yambopy
- GW (quick port just for demo purposes)
- Parallelization (quick port just for demo purposes)