Compile the libraries in Yambo independently - Revision history

Attacc at 22:07, 2 February 2022

2022-02-02T22:07:47Z

← Older revision		Revision as of 22:07, 2 February 2022
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	make install		make install

	In a similar way you can configure the other libraries. In this way you can solve problems in in each library individually.		In a similar way you can configure the other libraries. In this way you can solve problems in each library individually.

	Then you can link them in Yambo with the command:		Then you can link them in Yambo with the command:

	./configure --with-hdf5-path=/home/pippo/mylib --with-netcdf-path=/home/pippo/mylib --with-netcdff-path=/home/pippo/mylib		./configure --with-hdf5-path=/home/pippo/mylib --with-netcdf-path=/home/pippo/mylib --with-netcdff-path=/home/pippo/mylib

2022-02-01T22:54:50Z

← Older revision		Revision as of 22:54, 1 February 2022
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	Then you can link them in Yambo with the command:		Then you can link them in Yambo with the command:

	~~'''~~./configure --with-hdf5-path=/home/pippo/mylib --with-netcdf-path=/home/pippo/mylib --with-netcdff-path=/home/pippo/mylib~~'''~~		./configure --with-hdf5-path=/home/pippo/mylib --with-netcdf-path=/home/pippo/mylib --with-netcdff-path=/home/pippo/mylib

2022-02-01T22:54:30Z

← Older revision		Revision as of 22:54, 1 February 2022
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	The file <span style="color:blue">package.list</span> contains the libraries list and the link to download them.<br>		The file <span style="color:blue">package.list</span> contains the libraries list and the link to download them.<br>
	Now we will show some example of external compilation of these libraries using intel fortran. <br>		Now we will show some example of external compilation of these libraries using intel fortran. <br>
	First of all create a folder where you want install them, in our case: /home/pippo/mylib		First of all create a folder where you want install them, in our case: <span style="color:green">/home/pippo/mylib</span>

	We start from '''hdf5''', unpack the library and then configure it with the command:		We start from '''hdf5''', unpack the library and then configure it with the command:
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	then the '''netcdf-c''' that requires the previous compiled HDF5:		then the '''netcdf-c''' that requires the previous compiled HDF5:

	export LD_LIBRARY_PATH="/home/~~ecannuccia~~/~~YamboLibs~~/lib:$LD_LIBRARY_PATH"		export LD_LIBRARY_PATH="/home/pippo/mylib/lib:$LD_LIBRARY_PATH"
	./configure FC=ifort CC=icc CXX=icc --prefix=/home/pippo/mylib/ LIBS="-L/home/pippo/mylib/lib" CFLAGS="-O2 -I/home/pippo/mylib/include/"		./configure FC=ifort CC=icc CXX=icc --prefix=/home/pippo/mylib/ LIBS="-L/home/pippo/mylib/lib" CFLAGS="-O2 -I/home/pippo/mylib/include/"
	make		make

2022-02-01T22:19:49Z

← Older revision		Revision as of 22:19, 1 February 2022
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	Then you can link them in Yambo with the command:		Then you can link them in Yambo with the command:

	./configure --with-hdf5-path=/home/pippo/mylib --with-netcdf-path=/home/pippo/mylib --with-netcdff-path=/home/pippo/mylib		'''./configure --with-hdf5-path=/home/pippo/mylib --with-netcdf-path=/home/pippo/mylib --with-netcdff-path=/home/pippo/mylib'''

2022-02-01T22:19:24Z

← Older revision		Revision as of 22:19, 1 February 2022
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	First of all create a folder where you want install them, in our case: /home/pippo/mylib		First of all create a folder where you want install them, in our case: /home/pippo/mylib

	We start from hdf5, unpack the library and then configure it with the command:		We start from '''hdf5''', unpack the library and then configure it with the command:

	cd hdf5-1.12.0/		cd hdf5-1.12.0/
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	make install		make install

	then the netcdf-c that requires the previous compiled HDF5:		then the '''netcdf-c''' that requires the previous compiled HDF5:

	export LD_LIBRARY_PATH="/home/ecannuccia/YamboLibs/lib:$LD_LIBRARY_PATH"		export LD_LIBRARY_PATH="/home/ecannuccia/YamboLibs/lib:$LD_LIBRARY_PATH"
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	make install		make install

	then the netcdf-f that requires the netcdf-c to be configured and compiled:		then the '''netcdf-f''' that requires the netcdf-c to be configured and compiled:

	./configure FC=ifort F77=ifort CC=icc CXX=icc --prefix=/home/pippo/mylib/ LIBS="-L/home/pippo/mylib/lib" CFLAGS="-O2 -I/home/pippo/mylib/"		./configure FC=ifort F77=ifort CC=icc CXX=icc --prefix=/home/pippo/mylib/ LIBS="-L/home/pippo/mylib/lib" CFLAGS="-O2 -I/home/pippo/mylib/"

2022-02-01T22:18:55Z

@@ Line 17: / Line 17: @@
   hdf5-1.12.0.tar.gz     libxc-5.1.5.tar.gz  Makefile.loc  netcdf-fortran-4.5.3.tar.gz
-The file  <span style="color:blue">package.list</span> contains the libraries list and the link to download them.
+The file  <span style="color:blue">package.list</span> contains the libraries list and the link to download them.<br>
-Now
+Now we will show some example of external compilation of these libraries using intel fortran. <br>

2022-02-01T21:57:15Z

← Older revision		Revision as of 21:57, 1 February 2022
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	If you configured Yambo and the compilation is stuck at some library you can find		If you configured Yambo and the compilation is stuck at some library you can find
	the tar.gz file of the libraries in:		the tar.gz file of the libraries in:

			lib/archive/

			for example:

			fftw-3.3.6-pl1.tar.gz iotk-y1.2.2.tar.gz Makefile netcdf-c-4.7.4.tar.gz package.list
			hdf5-1.12.0.tar.gz libxc-5.1.5.tar.gz Makefile.loc netcdf-fortran-4.5.3.tar.gz

			The file <span style="color:blue">package.list</span> contains the libraries list and the link to download them.
			Now

2022-02-01T21:50:29Z

← Older revision		Revision as of 21:50, 1 February 2022
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	If you configured Yambo and the compilation is stuck at some library you can find		If you configured Yambo and the compilation is stuck at some library you can find
	~~all libraries~~ tar.gz ~~files~~ in:		the tar.gz file of the libraries in:

2022-02-01T21:32:37Z

← Older revision		Revision as of 21:32, 1 February 2022
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	In general Yambo requires a series of libraries: '''HDF5''', '''NetCDF-c''', '''NetCDF-f''', '''fft''', '''lapack''', '''blacs''', '''iotk''', <br>		In general Yambo requires a series of libraries: '''HDF5''', '''NetCDF-c''', '''NetCDF-f''', '''fft''', '''lapack''', '''blacs''', '''iotk''', '''libxc'''<br>
	plus a series of optional libreries: '''yaml''', '''slepc''', '''petsc''', '''blacs''', '''scalapack''', '''futile'''.		plus a series of optional libreries: '''yaml''', '''slepc''', '''petsc''', '''blacs''', '''scalapack''', '''futile'''.

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	of a specific library can fail. <br>		of a specific library can fail. <br>
	Here we will show you how to compile and install some of them and the use with Yambo.		Here we will show you how to compile and install some of them and the use with Yambo.

			If you configured Yambo and the compilation is stuck at some library you can find
			all libraries tar.gz files in:

2022-02-01T21:23:13Z

← Older revision		Revision as of 21:23, 1 February 2022
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	Some of this libraries are included in the Yambo package, while other are downloaded from the internet. <br>		Some of this libraries are included in the Yambo package, while other are downloaded from the internet. <br>
	In general Yambo configure and compile all these libraries. However on some particular computer, configure/compilation		In general Yambo configure and compile all these libraries. However on some particular computer, configure/compilation
	of a specific library can fail. Here we will show you how to compile and install some of them and the use with Yambo.		of a specific library can fail. <br>
			Here we will show you how to compile and install some of them and the use with Yambo.